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2025 SMEA Faculty Publications

Our faculty had a productive research year. Below is the list of our 2025 publications for your easy access. The underlined co-authors are our students. We hope you enjoy learning about our newest work. 

Ere Aceves Bueno:

  1. Clemens J, Ruesink JL, Donoghue C, Griffin PJ, Aceves-Bueno E (2025) Environmental justice in ecosystem restoration frameworks. Restoration Ecology e70165.
  2. Lawson JM, Jean S, Steinkruger A, Castellanos-Rico M, Goto GM, Cisneros-Mata MÁ, Aceves-Bueno E, Warham MM, Sachs AM, Gaines SD (2025) Substantial gains and little downside from farming of Totoaba macdonaldi. npj Ocean Sustainability 4(1): 43.
  3. Castillo LS, Irlanda CEF, Aceves-Bueno E, Froehlich H, Mancilla C, et al. (2025) Aquaculture isn’t always the answer: rethinking blue transitions through justice and community experience. Global Environmental Change 94: 103046.
  4. Castillo LS, Froehlich HE, Wilson JR, Gephart JA, Aceves-Bueno E, et al. (2025) Revisiting small-scale aquaculture (SSA). Reviews in Aquaculture 18(1): e70110.
  5. Nordal R, Beaudreau AH, Aceves-Bueno E, Olson A (2025) Assessing the social-ecological dimensions of Dungeness crab fishery closures in Southeast Alaska from analysis of public records. Fisheries Research 288: 107429.

 Anne Beaudreau († = co-lead authors):  

  1. Golden AS, Feddern M, Marshall K, Hunsicker ME, Beaudreau AH, Samhouri J, Oken KL (2025) Prioritizing qualitative, ecosystem-based risk assessments to maximize impact in single-species fishery management. Ocean & Coastal Management 270: 107917.
  2. Beaudreau AH, Lowry D, Blaine J, Selleck J, Pacunski R, Meyer K (2025) Social-ecological goals and outcomes of public engagement for recovery of endangered and threatened rockfishes (Sebastes spp.). PLoS One 20(9): e0331686. 
  3. Nordal R†, Beaudreau AH, Aceves-Bueno E, Olson A (2025) Assessing the social-ecological dimensions of Dungeness crab fishery closures in Southeast Alaska from analysis of public records. Fisheries Research 288, 107429. 
  4. Adams E†, Hoffman N†, Lechtenberg J†, Plummer KA†, Winterhalter J†, Sergeant CJ, Beaudreau AH (2025) Excavating the regulatory process and risks posed by Alaska hardrock mine expansions. FACETS
  5. Harvey CJ, Clay PM, Selden R, Moore SK, Andrews KS, deReynier YL, Beaudreau AH, Liu OR, Norman KC, Samhouri JF, Bellquist L, Burden M, Colburn LL, Haltuch MA, Harley A, Kaplan IC, Kasperski S, Klajbor W, Lewis-Smith C, Tolimieri N, Watson JL, Wise S. (2025) Embracing social-ecological system complexity to promote climate-ready fisheries. Reviews in Fish Biology and Fisheries.
  6. Sutton L, Ulaski BP, Lundstrom NC, Whitney EJ, Fellman JB, Beaudreau AH, Jenckes J, Gabara SS, Konar B. (2025) Seasonality and hydroclimatic variability shape the functional and taxonomic diversity of nearshore fish communities in glacierized estuaries of Alaska. Journal of Experimental Marine Biology and Ecology 584, 152086. 

Nives Dolsak:

  1. Morton K,  Dolsak N, Prakash A. (2025) Comparing Support for Deep-Sea Mining among the Mass Public and Environmental Non-Governmental Organizations. Environmental Research Letters, 2025, 20 114065.  
  2. Andonova L, Zucca A, Montfort S, Dolšak N, Prakash A (2025) International climate adaptation assistance: Assessing public support in Switzerland. PLoS ONE 20(2): e0317344. 
  3. Uji A, Song J, Dolšak N, Prakash A (2025) Penalty or premium for foreign ownership in Thailand? Comparing public support for waste-to-energy plants operated by Thai, Japanese, and Chinese Companies. PLoS One 20(7): e0328165. 
  4. Uji A, Song J, Dolšak N, Prakash A (2025). Postmaterialism and Environmental Protection Revisited: Domestic Plastic Bag Regulations, 1992–2019. Global Environmental Politics 2025; 25 (1): 46–66. 

Dave Fluarty: 

  1. Jørgensen, L. L. (ed.). 2025. Ecosystem assessment of the Central Arctic Ocean: Description of human activities, its pressures, and vulnerability of the ecosystem. ICES Cooperative Research Reports Vol. 361. 223 pp. 

Ryan Kelly:

  1. Ip, Yin Cheong Aden, Gledis Guri, Elizabeth Andruszkiewicz Allan, and Ryan P. Kelly. 2025.Fish from the sky: Airborne eDNA tracks aquatic life. Scientific Reports (In Press). 
  2. Brandão-Dias, P. F., Shaffer, M., Guri, G., Parsons, K. M., Kelly, R. P., and Allan, E. A. (2025). Differential decay of multiple environmental nucleic acid components. Scientific Reports, 15(1), 26791. 
  3. Xiong, J., P.. MacCready, E. Brasseale, E.A. Allan, A. Ramón-Laca, K.M. Parsons, M.R. Shaffer, and R.P..Kelly. 2025. Advective Transport Drives Environmental DNA Dispersal in an Estuary. Environmental Science & Technology. 
  4. Brasseale, E., N.G. Adams, E.A. Allan, E.K. Jacobson, R.P.. Kelly, O.R. Liu, S. Moore, M. Shaffer, J. Xiong, and K. Parsons. 2025. Marine eDNA production and loss mechanisms. JGR Oceans e2024JC021643. 
  5. Shaffer, M.R., E.A. Allan, A.M. van Cise, K.M. Parsons, A.O. Shelton, and R.P. Kelly.  2025. Observation Bias in Metabar-coding. Molecular Ecology Resources e14119. 
  6. Keller, A.G., and R.P.. Kelly. 2025. eDNAjoint: An R package for interpreting paired or semi-paired environmental DNA and traditional survey data in a Bayesian framework. Methods in Ecology and Evolution 16(5),886-894. 
  7. Allan E, Shaffer MR, Kelly RP, Parsons K. 2025. Optimizing target-to-total DNA ratio in eDNA studies: effects of sampling, preservation, and extraction methods on single-species detection. PeerJ 13:e20127